Data Category ihm_external_reference_info

General

Category name
ihm_external_reference_info
Required in PDB entries
no
Category group membership
ihm_group
Used in current PDB entries
No

Category Relationship Diagrams

70
View full category relationship diagram including all dictionary data categories

Category Description

   Category holds links to other external data sources for the I/H model entry.
   Input datasets held in other databases such as EMDB, BMRB, SASBDB etc. 
   are referenced in the IHM_DATASET_RELATED_DB_REFERENCE category. 
   This data category, along with IHM_EXTERNAL_FILES category, holds information
   regarding other non-database external data sources, such as  DOIs (digital 
   object identifiers) or supplementary files stored locally. The DOIs can either 
   lead to the external data file(s) directly (as in case of DOIs provided by the PDB) 
   or might lead to an HTML landing page (as provided by Zenodo). In the latter case, 
   additional URL (Uniform Resource Locator) information is required to retrieve 
   the external data file(s).

Category Examples

3

 
 loop_
    _ihm_external_reference_info.reference_id
    _ihm_external_reference_info.reference_provider
    _ihm_external_reference_info.reference_type
    _ihm_external_reference_info.reference
    _ihm_external_reference_info.refers_to
    _ihm_external_reference_info.associated_url

    1  'Zenodo' 'DOI' '10.5281/zenodo.46266'  'Archive'  'https://zenodo.org/record/46266/files/nup84-v1.0.zip'
    # ...  abbreviated ...
 
    _ihm_external_reference_info.reference_id       2
    _ihm_external_reference_info.reference_type     'Supplementary Files'
    _ihm_external_reference_info.reference          .
    _ihm_external_reference_info.refers_to          'Other'
 
 loop_
    _ihm_external_reference_info.reference_id
    _ihm_external_reference_info.reference_provider
    _ihm_external_reference_info.reference_type
    _ihm_external_reference_info.reference
    _ihm_external_reference_info.refers_to
    _ihm_external_reference_info.associated_url

    3 'Zenodo' 'DOI' '10.5281/zenodo.58025' 'File' 'https://zenodo.org/record/58025/files/Nup84complex_particles.spd'
    # ...  abbreviated ...